Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf262 domain-containing protein | HMY34_08760 | Not Available | Negative | 1791641 - 1793992 | 90559.9 |
| phosphoadenosine phosphosulfate reductase family protein | HMY34_08765 | Q60377 | Negative | 1794014 - 1794841 | 32037.6 |
| hypothetical protein | HMY34_08770 | Not Available | Negative | 1794834 - 1798313 | 130930.0 |
| duf4007 family protein | HMY34_08775 | Not Available | Negative | 1798310 - 1799245 | 35449.0 |
| hypothetical protein | HMY34_08780 | P25287 | Negative | 1799242 - 1799457 | 8133.92 |
| hypothetical protein | HMY34_08785 | Not Available | Positive | 1799614 - 1800060 | 16848.0 |
| duf2281 domain-containing protein | HMY34_08790 | Not Available | Positive | 1800111 - 1800326 | 8045.68 |
| hit family protein | HMY34_08795 | P75504 | Negative | 1800330 - 1800716 | 14343.2 |
| hypothetical protein | HMY34_08800 | Not Available | Positive | 1800800 - 1801018 | 8040.91 |
| type ii toxin-antitoxin system vapc family toxin | HMY34_08805 | Not Available | Positive | 1801015 - 1801455 | 16565.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
