Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | HMY34_08660 | O33600 | Positive | 1771455 - 1773311 | 69595.6 |
| yeee/yede family protein | HMY34_08665 | P33015 | Positive | 1773376 - 1774641 | 44604.0 |
| Trna-lys | Not Available | Not Available | Positive | 1774702 - 1774777 | Not Available |
| brna antitoxin family protein | HMY34_08675 | Not Available | Negative | 1775355 - 1775642 | 10739.7 |
| hypothetical protein | HMY34_08680 | Q5U367 | Negative | 1775859 - 1776230 | 14812.2 |
| hypothetical protein | HMY34_08685 | Not Available | Negative | 1776348 - 1776728 | 14022.1 |
| yifb family mg chelatase-like aaa atpase | HMY34_08690 | P57015 | Positive | 1776970 - 1778478 | 54835.8 |
| ybfb/yjij family mfs transporter | HMY34_08695 | P39381 | Positive | 1778550 - 1779707 | 41144.4 |
| abc transporter atp-binding protein | HMY34_08700 | Q8XXY9 | Positive | 1779716 - 1780594 | 32594.3 |
| abc transporter permease | HMY34_08705 | P0AGH1 | Positive | 1780591 - 1781601 | 37273.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
