Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| undecaprenyl-phosphate alpha-n-acetylglucosaminyl 1-phosphate transferase | HMY34_08610 | Q8Z386 | Negative | 1762425 - 1763501 | 38566.2 |
| holliday junction branch migration dna helicase ruvb | HMY34_08615 | Q2SCL3 | Positive | 1764464 - 1765531 | 39480.5 |
| tol-pal system-associated acyl-coa thioesterase | HMY34_08620 | P44679 | Positive | 1765524 - 1765934 | 15623.8 |
| protein tolq | HMY34_08625 | P0ABV0 | Positive | 1765931 - 1766617 | 25368.8 |
| protein tolr | HMY34_08630 | P50599 | Positive | 1766614 - 1767039 | 15226.5 |
| cell envelope integrity protein tola | HMY34_08635 | Not Available | Positive | 1767066 - 1768349 | 45212.6 |
| tol-pal system beta propeller repeat protein tolb | HMY34_08640 | Q4UXL2 | Positive | 1768355 - 1769590 | 43362.8 |
| ompa family protein | HMY34_08645 | P0A913 | Positive | 1769611 - 1770198 | 20547.0 |
| tol-pal system protein ybgf | HMY34_08650 | P0A130 | Positive | 1770203 - 1771126 | 34021.3 |
| hypothetical protein | HMY34_08655 | Not Available | Positive | 1771231 - 1771449 | 8064.74 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
