Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | HMY34_08560 | P07874 | Negative | 1751956 - 1753392 | 52370.5 |
| gdp-l-fucose synthase | HMY34_08565 | P32055 | Negative | 1753412 - 1754380 | 36212.2 |
| gdp-mannose 4,6-dehydratase | HMY34_08570 | P0AC90 | Negative | 1754386 - 1755534 | 43166.6 |
| glycosyltransferase | HMY34_08575 | P71239 | Negative | 1755548 - 1756357 | 30563.8 |
| hypothetical protein | HMY34_08580 | O14190 | Negative | 1756350 - 1756844 | 18826.4 |
| hypothetical protein | HMY34_08585 | Q96F25 | Negative | 1756816 - 1757301 | 18366.6 |
| hypothetical protein | HMY34_08590 | Not Available | Negative | 1757255 - 1758538 | 48281.0 |
| glycosyltransferase family 4 protein | HMY34_08595 | P26402 | Negative | 1758550 - 1759701 | 43658.0 |
| polysaccharide biosynthesis protein | HMY34_08600 | P37781 | Negative | 1759734 - 1761116 | 50886.4 |
| degt/dnrj/eryc1/strs family aminotransferase | HMY34_08605 | Q9A9H3 | Negative | 1761268 - 1762392 | 41500.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
