Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-6-phosphate dehydrogenase | HMY34_08460 | Q58611 | Negative | 1722680 - 1725712 | 116391.0 |
| atpase | HMY34_08465 | O50224 | Negative | 1725820 - 1727487 | 61669.1 |
| restriction endonuclease subunit s | HMY34_08470 | Q58615 | Negative | 1727474 - 1728748 | 48929.4 |
| sam-dependent dna methyltransferase | HMY34_08475 | Q60297 | Negative | 1728748 - 1730964 | 83184.9 |
| tuse/dsrc/dsvc family sulfur relay protein | HMY34_08480 | P45573 | Negative | 1731110 - 1731409 | 11187.5 |
| lipase | HMY34_08485 | Q9KL83 | Negative | 1731502 - 1733520 | 68293.9 |
| porin | HMY34_08490 | Q9K1M2 | Negative | 1733533 - 1734273 | 27179.4 |
| transposase | HMY34_08495 | Not Available | Negative | 1734280 - 1735341 | 40920.1 |
| glucose-6-phosphate dehydrogenase | HMY34_08500 | Not Available | Positive | 1735439 - 1736487 | 39920.6 |
| hypothetical protein | HMY34_08505 | P43838 | Negative | 1736469 - 1737194 | 24062.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
