Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quinolinate synthase nada | HMY34_08310 | Q982F2 | Negative | 1693748 - 1694788 | 38043.5 |
| dmt family transporter | HMY34_08315 | P38943 | Negative | 1694940 - 1695815 | 31550.7 |
| glucose-6-phosphate dehydrogenase | HMY34_08320 | Q87VK8 | Positive | 1696012 - 1697484 | 55423.7 |
| hypothetical protein | HMY34_08325 | Not Available | Negative | 1697487 - 1698224 | 26796.3 |
| hypothetical protein | HMY34_08330 | Not Available | Positive | 1698406 - 1698582 | 6697.97 |
| hypothetical protein | HMY34_08335 | Not Available | Positive | 1698657 - 1700243 | 57727.7 |
| hypothetical protein | HMY34_08340 | Not Available | Positive | 1700258 - 1701391 | 42125.5 |
| hypothetical protein | HMY34_08345 | Not Available | Positive | 1701388 - 1701807 | 16102.6 |
| glucose-6-phosphate dehydrogenase | HMY34_08350 | Q9HUN6 | Positive | 1701783 - 1703648 | 70201.3 |
| hypothetical protein | HMY34_08355 | Not Available | Positive | 1703759 - 1704538 | 28922.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
