Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c39 family peptidase | HMY34_08260 | P59852 | Negative | 1684463 - 1685149 | 25524.9 |
| transporter | HMY34_08265 | Not Available | Negative | 1685158 - 1686075 | 32653.5 |
| hypothetical protein | HMY34_08270 | Not Available | Negative | 1686178 - 1686474 | 10699.6 |
| hypothetical protein | HMY34_08275 | Not Available | Negative | 1686633 - 1686992 | 12990.4 |
| is630 family transposase | HMY34_08280 | Not Available | Negative | 1687504 - 1688532 | 39180.1 |
| sel1 repeat family protein | HMY34_08285 | Not Available | Negative | 1688588 - 1689109 | 19043.8 |
| hypothetical protein | HMY34_08290 | P54292 | Positive | 1689746 - 1690489 | 28273.9 |
| protein-disulfide reductase dsbd | HMY34_08295 | Q8XV41 | Negative | 1690492 - 1692378 | 66311.5 |
| thioredoxin fold domain-containing protein | HMY34_08300 | Q7MZX2 | Negative | 1692383 - 1693417 | 39610.9 |
| thioredoxin family protein | HMY34_08305 | P50338 | Negative | 1693432 - 1693761 | 12440.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
