Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | HMY34_08210 | Not Available | Negative | 1673203 - 1673868 | 23179.8 |
| atp-binding cassette domain-containing protein | HMY34_08215 | P02915 | Positive | 1674170 - 1674943 | 28408.5 |
| transporter substrate-binding domain-containing protein | HMY34_08220 | G3XD47 | Positive | 1674961 - 1675740 | 27927.4 |
| abc transporter permease | HMY34_08225 | P52094 | Positive | 1675744 - 1676430 | 25092.8 |
| abc transporter permease | HMY34_08230 | P35113 | Positive | 1676427 - 1677119 | 25584.7 |
| amino acid transporter | HMY34_08235 | B5QXJ3 | Negative | 1677098 - 1677715 | 22018.3 |
| fic family protein | HMY34_08240 | B4GJC1 | Positive | 1677783 - 1679009 | 45915.2 |
| nucleotidyltransferase | HMY34_08245 | Not Available | Negative | 1679125 - 1680039 | 34777.6 |
| ygiq family radical sam protein | HMY34_08250 | Q87VK8 | Positive | 1680148 - 1682475 | 86993.4 |
| s8 family serine peptidase | HMY34_08255 | Q9SZV5 | Negative | 1682478 - 1684430 | 69431.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
