Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | HMY34_08160 | P0DV91 | Negative | 1658026 - 1659363 | 50227.0 |
| hypothetical protein | HMY34_08165 | Not Available | Positive | 1661338 - 1661754 | 14102.1 |
| hypothetical protein | HMY34_08170 | A0A0C5URS1 | Negative | 1661807 - 1665253 | 128353.0 |
| uracil-dna glycosylase | HMY34_08175 | Q1I5T6 | Negative | 1665367 - 1666065 | 25377.4 |
| transcriptional regulator | HMY34_08180 | O50224 | Positive | 1666176 - 1667414 | 46498.2 |
| glucose-6-phosphate dehydrogenase | HMY34_08185 | Q8ES39 | Negative | 1667430 - 1668124 | 26020.0 |
| urea abc transporter atp-binding protein urtd | HMY34_08190 | P0A194 | Negative | 1668125 - 1668916 | 28903.5 |
| urea abc transporter permease subunit urtc | HMY34_08195 | P22729 | Negative | 1668913 - 1670025 | 40930.3 |
| urea abc transporter permease subunit urtb | HMY34_08200 | P0A2J2 | Negative | 1670029 - 1671591 | 55594.5 |
| urea abc transporter substrate-binding protein | HMY34_08205 | P27017 | Negative | 1671693 - 1673003 | 47922.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
