Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endou domain-containing protein | HMY34_07960 | Q813X6 | Negative | 1617993 - 1618592 | 21354.1 |
| atp-binding protein | HMY34_07965 | Q60260 | Positive | 1618789 - 1619760 | 37528.1 |
| hypothetical protein | HMY34_07970 | Not Available | Negative | 1620045 - 1620635 | 22072.9 |
| hypothetical protein | HMY34_07975 | Not Available | Negative | 1620641 - 1620922 | 10802.0 |
| hypothetical protein | HMY34_07980 | Not Available | Negative | 1620919 - 1621740 | 32251.9 |
| atp-binding protein | HMY34_07985 | P9WLM8 | Positive | 1621944 - 1623170 | 46226.8 |
| hypothetical protein | HMY34_07990 | Not Available | Positive | 1623328 - 1624035 | 27318.1 |
| duf3616 domain-containing protein | HMY34_07995 | Not Available | Negative | 1624004 - 1625077 | 39140.5 |
| oxidoreductase | HMY34_08000 | P26646 | Negative | 1625091 - 1626074 | 34381.8 |
| dna polymerase i | HMY34_08005 | Q9HT80 | Negative | 1626110 - 1628866 | 101376.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
