Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-isopropylmalate synthase | HMY34_07910 | Q8XSZ5 | Negative | 1609331 - 1611010 | 61117.6 |
| lrp/asnc family transcriptional regulator | HMY34_07915 | Q9I1M3 | Positive | 1611140 - 1611601 | 17316.2 |
| upf0175 family protein | HMY34_07920 | Not Available | Positive | 1611637 - 1611891 | 9234.14 |
| duf3368 domain-containing protein | HMY34_07925 | Not Available | Positive | 1611891 - 1612364 | 17268.1 |
| sigma 54-interacting transcriptional regulator | HMY34_07930 | P38035 | Positive | 1612376 - 1613968 | 59925.2 |
| trap transporter substrate-binding protein | HMY34_07935 | P37735 | Positive | 1614174 - 1615181 | 36848.3 |
| trap transporter small permease | HMY34_07940 | O07837 | Positive | 1615262 - 1615882 | 22953.2 |
| trap transporter large permease subunit | HMY34_07945 | O07838 | Positive | 1615879 - 1617162 | 45672.7 |
| universal stress protein | HMY34_07950 | Q57997 | Positive | 1617173 - 1617664 | 17997.9 |
| hypothetical protein | HMY34_07955 | Not Available | Negative | 1617661 - 1617969 | 11605.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
