Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | HMY34_07860 | Q8EIX4 | Positive | 1601529 - 1601804 | 9695.71 |
| type ii toxin-antitoxin system hipa family toxin | HMY34_07865 | Q8EIX3 | Positive | 1601791 - 1603086 | 48198.0 |
| atp-binding protein | HMY34_07870 | P9WLM8 | Negative | 1603092 - 1604336 | 46689.4 |
| phosphotransferase | HMY34_07875 | P74594 | Negative | 1604393 - 1605103 | 26272.7 |
| transposase | HMY34_07880 | Not Available | Negative | 1605143 - 1606204 | 40920.1 |
| hypothetical protein | HMY34_07885 | Not Available | Negative | 1606204 - 1606398 | 6653.88 |
| mipa/ompv family protein | HMY34_07890 | P06111 | Positive | 1606422 - 1607147 | 25645.1 |
| tigr00266 family protein | HMY34_07895 | Q5XDZ5 | Positive | 1607176 - 1607886 | 24932.9 |
| lysm peptidoglycan-binding domain-containing protein | HMY34_07900 | Q49UX4 | Negative | 1607906 - 1608529 | 22377.9 |
| septal ring lytic transglycosylase rlpa family protein | HMY34_07905 | Q9KTF4 | Positive | 1608858 - 1609334 | 17370.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
