Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2132 domain-containing protein | HMY34_07760 | Q5E7H1 | Positive | 1580007 - 1580270 | 9890.96 |
| hypothetical protein | HMY34_07765 | Q4ZZ58 | Positive | 1580271 - 1581299 | 37707.0 |
| transcriptional regulator | HMY34_07770 | P46372 | Negative | 1581279 - 1582460 | 44251.0 |
| helix-turn-helix transcriptional regulator | HMY34_07775 | Q8EIX4 | Positive | 1582636 - 1582911 | 9758.86 |
| type ii toxin-antitoxin system hipa family toxin | HMY34_07780 | Q8EIX3 | Positive | 1582898 - 1584199 | 48205.2 |
| hypothetical protein | HMY34_07785 | Not Available | Negative | 1584262 - 1584879 | 23740.6 |
| atp-binding protein | HMY34_07790 | P03754 | Negative | 1584916 - 1585224 | 11455.8 |
| abc transporter | HMY34_07795 | Not Available | Negative | 1585199 - 1585972 | 29744.4 |
| hypothetical protein | HMY34_07800 | Not Available | Negative | 1586066 - 1586488 | 16178.2 |
| upf0175 family protein | HMY34_07805 | P58322 | Positive | 1586542 - 1586790 | 9384.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
