Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMY34_07560 | Not Available | Negative | 1540619 - 1541125 | 18685.1 |
| hypothetical protein | HMY34_07565 | P55183 | Negative | 1541350 - 1543524 | 80303.8 |
| response regulator transcription factor | HMY34_07570 | P54662 | Negative | 1543535 - 1544215 | 24602.4 |
| hypothetical protein | HMY34_07575 | Not Available | Negative | 1544246 - 1545271 | 35831.4 |
| hypothetical protein | HMY34_07580 | Not Available | Negative | 1545315 - 1545626 | 11244.2 |
| hypothetical protein | HMY34_07585 | Not Available | Negative | 1545798 - 1546220 | 14761.0 |
| hypothetical protein | HMY34_07590 | Q6TMK4 | Negative | 1546432 - 1548234 | 66077.5 |
| hypothetical protein | HMY34_07595 | Not Available | Positive | 1548551 - 1548994 | 14626.5 |
| rna-binding protein | HMY34_07600 | P0ACH0 | Negative | 1549081 - 1549473 | 15506.5 |
| ycgn family cysteine cluster protein | HMY34_07605 | A7HRI8 | Negative | 1549449 - 1549916 | 18043.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
