Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdopterin-dependent oxidoreductase | HMY34_07510 | Q71EW5 | Positive | 1529556 - 1531652 | 77353.2 |
| hypothetical protein | HMY34_07515 | Not Available | Positive | 1531667 - 1532557 | 32553.9 |
| atp-binding protein | HMY34_07520 | Q60260 | Negative | 1532514 - 1533824 | 50591.4 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | HMY34_07525 | Not Available | Positive | 1533958 - 1534236 | 10654.6 |
| type ii toxin-antitoxin system vapc family toxin | HMY34_07530 | P55511 | Positive | 1534236 - 1534649 | 15496.8 |
| sulfur reduction protein dsre | HMY34_07535 | Q58170 | Negative | 1534704 - 1535117 | 14469.0 |
| ergothioneine biosynthesis protein egtb | HMY34_07540 | A0R5N0 | Positive | 1535262 - 1536488 | 47484.7 |
| l-histidine n(alpha)-methyltransferase | HMY34_07545 | A0R5M8 | Positive | 1536485 - 1537456 | 36131.8 |
| aminotransferase class v-fold plp-dependent enzyme | HMY34_07550 | A6TAE4 | Positive | 1537464 - 1538597 | 42064.3 |
| asma family protein | HMY34_07555 | P28249 | Negative | 1538581 - 1540569 | 73258.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
