Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1287 domain-containing protein | HMY34_07460 | P32668 | Negative | 1522000 - 1522647 | 24523.5 |
| non-heme iron oxygenase ferredoxin subunit | HMY34_07465 | Q07947 | Negative | 1522709 - 1523023 | 11269.5 |
| sdr family oxidoreductase | HMY34_07470 | Q8VDR7 | Positive | 1523052 - 1523897 | 31104.2 |
| duf615 domain-containing protein | HMY34_07475 | Q1H3T4 | Positive | 1523902 - 1524420 | 20336.2 |
| hydroxyacylglutathione hydrolase | HMY34_07480 | Q0AE32 | Negative | 1524428 - 1525207 | 28560.7 |
| guanylate kinase | HMY34_07485 | Q1QSI1 | Positive | 1525301 - 1525921 | 23316.4 |
| paai family thioesterase | HMY34_07490 | Not Available | Positive | 1525921 - 1526427 | 19372.7 |
| transporter substrate-binding domain-containing protein | HMY34_07495 | O81078 | Negative | 1526772 - 1527884 | 41103.5 |
| pseudouridine synthase | HMY34_07500 | Q8ZP51 | Negative | 1527996 - 1528976 | 36460.6 |
| peptide-methionine (r)-s-oxide reductase msrb | HMY34_07505 | Q8DJK9 | Negative | 1528987 - 1529433 | 16383.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
