Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c40 family peptidase | HMY34_07410 | P76190 | Negative | 1514104 - 1514730 | 22175.2 |
| sigma-54-dependent fis family transcriptional regulator | HMY34_07415 | Q06065 | Negative | 1514852 - 1515796 | 34769.2 |
| rok family protein | HMY34_07420 | P23917 | Positive | 1515908 - 1516831 | 32251.5 |
| duf4388 domain-containing protein | HMY34_07425 | Not Available | Negative | 1516797 - 1517225 | 15279.1 |
| trna pseudouridine(65) synthase truc | HMY34_07430 | Q8ZH72 | Negative | 1517242 - 1517979 | 27857.5 |
| cbs domain-containing protein | HMY34_07435 | Q9LEV3 | Positive | 1518073 - 1518501 | 15746.6 |
| 30s ribosomal protein s12 methylthiotransferase accessory protein ycao | HMY34_07440 | P75838 | Negative | 1518523 - 1520250 | 64232.6 |
| anti-sigma factor | HMY34_07445 | Not Available | Positive | 1520405 - 1520908 | 18450.2 |
| hypothetical protein | HMY34_07450 | Not Available | Negative | 1520920 - 1521129 | 7575.7 |
| hypothetical protein | HMY34_07455 | Not Available | Positive | 1521299 - 1522003 | 26626.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
