Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatc | HMY34_07360 | C1DQ38 | Negative | 1495839 - 1496126 | 10687.9 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatb | HMY34_07365 | B8GL96 | Negative | 1496129 - 1497559 | 52282.1 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gata | HMY34_07370 | Q60CK8 | Negative | 1497572 - 1499050 | 53174.3 |
| hypothetical protein | HMY34_07375 | Q14517 | Negative | 1499135 - 1503421 | 149633.0 |
| hypothetical protein | HMY34_07380 | P0A936 | Positive | 1503639 - 1504772 | 41822.8 |
| hypothetical protein | HMY34_07385 | Not Available | Positive | 1505013 - 1506275 | 47849.1 |
| abc transporter atp-binding protein/permease | HMY34_07390 | Q8T9W2 | Negative | 1506283 - 1508061 | 66393.7 |
| glucose-6-phosphate dehydrogenase | HMY34_07395 | Not Available | Negative | 1510707 - 1511288 | 21539.0 |
| tonb-dependent copper receptor | HMY34_07400 | Q6LLU3 | Positive | 1511540 - 1513579 | 73587.6 |
| copper chaperone pcu(a)c | HMY34_07405 | Q6ACU3 | Positive | 1513600 - 1514091 | 16935.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
