Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp cyclohydrolase i fole2 | HMY34_07310 | Q5R041 | Negative | 1486826 - 1487815 | 36345.4 |
| rod shape-determining protein mred | HMY34_07315 | P0ABH6 | Negative | 1487906 - 1488400 | 18169.1 |
| rod shape-determining protein mrec | HMY34_07320 | P44475 | Negative | 1488390 - 1489193 | 28847.8 |
| rod shape-determining protein | HMY34_07325 | P0A9X5 | Negative | 1489279 - 1490325 | 37038.2 |
| hsp33 family molecular chaperone hslo | HMY34_07330 | Q3J9G2 | Positive | 1490573 - 1491436 | 32139.3 |
| nad(p)h-dependent oxidoreductase | HMY34_07335 | Q8CHK7 | Positive | 1491467 - 1492051 | 22014.2 |
| alpha/beta fold hydrolase | HMY34_07340 | Q8K4F5 | Positive | 1492045 - 1492812 | 28087.8 |
| hypothetical protein | HMY34_07345 | Not Available | Negative | 1492809 - 1493762 | 34904.4 |
| hypothetical protein | HMY34_07350 | Not Available | Negative | 1493857 - 1494840 | 36077.7 |
| hypothetical protein | HMY34_07355 | Q2T7Q0 | Negative | 1495009 - 1495788 | 27876.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
