Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMY34_07260 | Not Available | Positive | 1479534 - 1479689 | 5276.29 |
| duf1566 domain-containing protein | HMY34_07265 | Not Available | Negative | 1479760 - 1480302 | 19675.7 |
| endonuclease domain-containing protein | HMY34_07270 | P45736 | Positive | 1480641 - 1480997 | 14647.4 |
| hypothetical protein | HMY34_07275 | Not Available | Negative | 1481237 - 1481380 | 5279.94 |
| duf1566 domain-containing protein | HMY34_07280 | Q5VV43 | Negative | 1481559 - 1483190 | 57013.8 |
| helix-turn-helix domain-containing protein | HMY34_07285 | Q9SB64 | Positive | 1483392 - 1484051 | 25077.4 |
| hypothetical protein | HMY34_07290 | Not Available | Negative | 1484046 - 1484486 | 16146.5 |
| phosphotransferase | HMY34_07295 | Q88QT3 | Positive | 1484582 - 1485589 | 38223.6 |
| nucleotidyltransferase family protein | HMY34_07300 | Q88QT2 | Positive | 1485598 - 1486284 | 25006.0 |
| isopentenyl-diphosphate delta-isomerase | HMY34_07305 | A4FK76 | Negative | 1486270 - 1486860 | 22106.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
