Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | HMY34_07210 | P74676 | Positive | 1469193 - 1469660 | 17829.6 |
| thiolase family protein | HMY34_07215 | Q12TB5 | Positive | 1469765 - 1470892 | 38421.4 |
| 3-hydroxyacyl-coa dehydrogenase | HMY34_07220 | O32178 | Positive | 1470889 - 1473180 | 82546.0 |
| amp-binding protein | HMY34_07225 | Q8ZES9 | Positive | 1473213 - 1474877 | 61378.5 |
| trna 2-thiocytidine biosynthesis protein ttca | HMY34_07230 | Q74GW7 | Positive | 1474925 - 1475686 | 28552.8 |
| acetate--coa ligase | HMY34_07235 | A0L576 | Positive | 1475846 - 1477792 | 71753.2 |
| prevent-host-death family protein | HMY34_07240 | Q47156 | Positive | 1478126 - 1478374 | 9083.17 |
| type ii toxin-antitoxin system death-on-curing family toxin | HMY34_07245 | Q06259 | Positive | 1478374 - 1478751 | 13496.1 |
| transcriptional regulator | HMY34_07250 | Not Available | Negative | 1478880 - 1479215 | 12426.0 |
| hypothetical protein | HMY34_07255 | Not Available | Negative | 1479236 - 1479532 | 11799.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
