Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pseudouridine synthase | HMY34_07160 | P0AA45 | Positive | 1457209 - 1457910 | 25625.8 |
| hypothetical protein | HMY34_07165 | Q8PC00 | Negative | 1457897 - 1460278 | 85505.5 |
| trypsin-like serine protease | HMY34_07170 | P39790 | Positive | 1460635 - 1461495 | 30841.0 |
| dde-type integrase/transposase/recombinase | HMY34_07175 | P35878 | Positive | 1461725 - 1462693 | 36387.1 |
| aaa family atpase | HMY34_07180 | P9WLM8 | Negative | 1462717 - 1463355 | 23379.1 |
| glycosyltransferase family 2 protein | HMY34_07185 | Q54J42 | Negative | 1463501 - 1464241 | 28362.3 |
| 4-amino-4-deoxy-l-arabinose-phospho-udp flippase | HMY34_07190 | Q6D2F5 | Negative | 1464234 - 1464632 | 14199.9 |
| eama family transporter | HMY34_07195 | A8FRQ9 | Negative | 1464629 - 1464994 | 13221.9 |
| duf5110 domain-containing protein | HMY34_07200 | B3PEE6 | Negative | 1464994 - 1467516 | 93836.1 |
| phospholipid carrier-dependent glycosyltransferase | HMY34_07205 | Not Available | Negative | 1467522 - 1469030 | 56448.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
