Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-6-phosphate dehydrogenase | HMY34_07060 | Not Available | Positive | 1437105 - 1437233 | 4282.17 |
| glucose-6-phosphate dehydrogenase | HMY34_07065 | Not Available | Negative | 1437257 - 1438141 | 33592.5 |
| hypothetical protein | HMY34_07070 | Not Available | Negative | 1438220 - 1438981 | 28135.8 |
| hypothetical protein | HMY34_07075 | Not Available | Negative | 1439160 - 1440077 | 34658.2 |
| dna oxidative demethylase alkb | HMY34_07080 | P37462 | Positive | 1440157 - 1440804 | 23054.8 |
| aaa family atpase | HMY34_07085 | P24423 | Negative | 1440814 - 1442502 | 64904.3 |
| aaa family atpase | HMY34_07090 | P24423 | Negative | 1442561 - 1444252 | 65021.5 |
| hypothetical protein | HMY34_07095 | Not Available | Negative | 1444305 - 1444889 | 21180.0 |
| duf2975 domain-containing protein | HMY34_07100 | Not Available | Positive | 1444966 - 1445496 | 19338.2 |
| helix-turn-helix transcriptional regulator | HMY34_07105 | O31834 | Positive | 1445501 - 1445716 | 7962.89 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
