Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysm peptidoglycan-binding domain-containing protein | HMY34_06960 | Q46798 | Negative | 1419451 - 1420116 | 23424.9 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | HMY34_06965 | B3PJA8 | Negative | 1420254 - 1420922 | 24042.2 |
| 5'/3'-nucleotidase sure | HMY34_06970 | A1WWY6 | Negative | 1420909 - 1421673 | 26941.0 |
| dna mismatch repair protein muts | HMY34_06975 | C4L8D4 | Positive | 1421708 - 1422196 | 18490.6 |
| hypothetical protein | HMY34_06980 | Not Available | Positive | 1422262 - 1424343 | 73230.4 |
| hypothetical protein | HMY34_06985 | Not Available | Positive | 1424343 - 1424762 | 14970.8 |
| aaa family atpase | HMY34_06990 | P24423 | Positive | 1424804 - 1426498 | 64837.4 |
| ribose-5-phosphate isomerase rpia | HMY34_06995 | B8GNF8 | Negative | 1426564 - 1427220 | 22631.4 |
| threonine ammonia-lyase, biosynthetic | HMY34_07000 | P53607 | Positive | 1427314 - 1428825 | 55493.3 |
| is982 family transposase | HMY34_07005 | Not Available | Positive | 1428865 - 1429743 | 33847.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
