Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMY34_06860 | P39832 | Negative | 1385597 - 1386385 | 27821.6 |
| zinc abc transporter atp-binding protein znuc | HMY34_06865 | Q4KKK4 | Negative | 1386378 - 1387160 | 28462.8 |
| zinc abc transporter solute-binding protein | HMY34_06870 | Q2YJH5 | Positive | 1387191 - 1388120 | 33739.6 |
| hypothetical protein | HMY34_06875 | Not Available | Negative | 1388114 - 1388461 | 12716.2 |
| diaminopimelate decarboxylase | HMY34_06880 | Q9KVL7 | Negative | 1388620 - 1389870 | 45424.4 |
| lipoprotein | HMY34_06885 | Not Available | Negative | 1389883 - 1389996 | 3941.94 |
| carboxylating nicotinate-nucleotide diphosphorylase | HMY34_06890 | P30819 | Negative | 1389993 - 1390823 | 29447.4 |
| nad(p)/fad-dependent oxidoreductase | HMY34_06895 | B7JBP8 | Negative | 1390894 - 1392165 | 46444.5 |
| multifunctional cca addition/repair protein | HMY34_06900 | B8GUR8 | Positive | 1392377 - 1393600 | 45689.0 |
| heat shock protein hspq | HMY34_06905 | Q1LT59 | Positive | 1393666 - 1393989 | 12444.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
