Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | HMY34_06810 | P9WLM8 | Positive | 1376321 - 1377568 | 46381.0 |
| hugz family protein | HMY34_06815 | Q9KL41 | Negative | 1377565 - 1378056 | 17886.6 |
| meta domain-containing protein | HMY34_06820 | P52644 | Positive | 1378201 - 1378665 | 16901.3 |
| hypothetical protein | HMY34_06825 | Not Available | Positive | 1378778 - 1379455 | 24638.4 |
| hypothetical protein | HMY34_06830 | Q8L866 | Positive | 1379468 - 1380628 | 42812.7 |
| hypothetical protein | HMY34_06835 | P49250 | Positive | 1380646 - 1382973 | 85356.7 |
| hypothetical protein | HMY34_06840 | Not Available | Positive | 1382975 - 1383385 | 14594.5 |
| c-type cytochrome | HMY34_06845 | Q49128 | Positive | 1383382 - 1384560 | 42863.9 |
| yfhl family 4fe-4s dicluster ferredoxin | HMY34_06850 | P00208 | Negative | 1384619 - 1384870 | 9218.94 |
| pantetheine-phosphate adenylyltransferase | HMY34_06855 | Q07W63 | Negative | 1384970 - 1385485 | 19039.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
