Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMY34_06260 | Not Available | Negative | 1277053 - 1277898 | 31006.1 |
| n-acetyl-gamma-glutamyl-phosphate reductase | HMY34_06265 | Q7NRT5 | Negative | 1277927 - 1278958 | 36824.6 |
| tlpa family protein disulfide reductase | HMY34_06270 | Q73B22 | Positive | 1279034 - 1279537 | 18308.7 |
| copd family protein | HMY34_06275 | O26018 | Positive | 1279541 - 1279966 | 16781.3 |
| duf302 domain-containing protein | HMY34_06280 | Not Available | Negative | 1280050 - 1280523 | 16728.7 |
| rna pyrophosphohydrolase | HMY34_06285 | Q3IDL9 | Negative | 1280736 - 1281206 | 18587.3 |
| had family hydrolase | HMY34_06290 | Q9I6F6 | Positive | 1281326 - 1281979 | 24659.3 |
| exodeoxyribonuclease v subunit gamma | HMY34_06295 | P07648 | Negative | 1281963 - 1285079 | 118572.0 |
| glycosyltransferase | HMY34_06300 | A0R043 | Positive | 1285192 - 1286307 | 42555.0 |
| glycosyltransferase | HMY34_06305 | Q48453 | Positive | 1286359 - 1287501 | 41778.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
