Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5, Complete Genome
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrogen regulation protein nr(i) | HMY34_05560 | P41789 | Negative | 1158147 - 1159565 | 53072.1 |
| pas domain-containing protein | HMY34_05565 | P19906 | Negative | 1159552 - 1160622 | 39898.4 |
| duf4212 domain-containing protein | HMY34_05570 | Not Available | Positive | 1161008 - 1161262 | 9816.15 |
| glucose-6-phosphate dehydrogenase | HMY34_05575 | P31640 | Positive | 1161275 - 1161847 | 20706.7 |
| transposase family protein | HMY34_05580 | Not Available | Positive | 1161959 - 1162453 | 18886.7 |
| hypothetical protein | HMY34_05585 | Q00462 | Positive | 1162450 - 1162866 | 15831.0 |
| vc_2705 family sodium/solute symporter | HMY34_05590 | P31640 | Positive | 1162904 - 1164265 | 47775.3 |
| sodium:proton antiporter nhad | HMY34_05595 | Q56EB3 | Positive | 1164361 - 1165767 | 50656.0 |
| trypsin-like serine protease | HMY34_05600 | O22609 | Positive | 1165923 - 1166624 | 24709.5 |
| duf2063 domain-containing protein | HMY34_05605 | Not Available | Negative | 1166611 - 1167381 | 28898.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
