Formosa sediminum PS13

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Formosa

Description

Formosa sediminum PS13 is a Gram-negative bacterium characterized by its rod-shaped morphology. This species has been identified with a single replicon, indicating a streamlined genetic organization that may contribute to its adaptability in various environments. The strain is cataloged under the accession number CP041637.1, which provides a reference point for genomic studies and further research. The traits of Formosa sediminum PS13 highlight its potential ecological role, particularly in sedimentary environments where Gram-negative bacteria are often crucial for nutrient cycling. The rod shape of the organism may confer advantages in motility and colonization, enabling it to thrive in complex habitats. Understanding the features of Formosa sediminum PS13 contributes to the broader knowledge of microbial diversity and function in sedimentary ecosystems. Its single replicon may suggest evolutionary adaptations that enhance survival in specific ecological niches, showcasing the intricate relationships between microbial life and their environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFormosa
SpeciesFormosa sediminum
StrainPS13

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Formosa sediminum PS13, Complete Genome

Gene Summary

Adenine Count

1323363 bp

Thymine Count

1343372 bp

Guanine Count

632864 bp

Cytosine Count

635187 bp

Genome Length

3934786 bp

Protein-coding Genes

3358 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ix secretion system outer membrane channel protein porvFNB79_01405Not AvailableNegative300024 - 30127446499.9
type ix secretion system sortase poruFNB79_01410Not AvailableNegative301308 - 305192143384.0
gliding motility lipoprotein gldjFNB79_01415Q9F3C7Positive305457 - 30712763654.5
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseFNB79_01420P96613Positive307194 - 30847746928.0
Trna-valNot AvailableNot AvailablePositive308532 - 308609Not Available
Trna-valNot AvailableNot AvailablePositive308686 - 308763Not Available
bifunctional folylpolyglutamate synthase/dihydrofolate synthaseFNB79_01435Q05865Negative308828 - 31004545292.5
energy transducer tonbFNB79_01440Not AvailableNegative310050 - 31093431366.1
biopolymer transporter exbdFNB79_01445Q9ZHV9Negative310936 - 31133114770.2
mota/tolq/exbb proton channel family proteinFNB79_01450O27101Negative311333 - 31203425138.9

Displaying genes 281 – 290 of 3420 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.