Formosa sediminum PS13

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Formosa

Description

Formosa sediminum PS13 is a Gram-negative bacterium characterized by its rod-shaped morphology. This species has been identified with a single replicon, indicating a streamlined genetic organization that may contribute to its adaptability in various environments. The strain is cataloged under the accession number CP041637.1, which provides a reference point for genomic studies and further research. The traits of Formosa sediminum PS13 highlight its potential ecological role, particularly in sedimentary environments where Gram-negative bacteria are often crucial for nutrient cycling. The rod shape of the organism may confer advantages in motility and colonization, enabling it to thrive in complex habitats. Understanding the features of Formosa sediminum PS13 contributes to the broader knowledge of microbial diversity and function in sedimentary ecosystems. Its single replicon may suggest evolutionary adaptations that enhance survival in specific ecological niches, showcasing the intricate relationships between microbial life and their environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFormosa
SpeciesFormosa sediminum
StrainPS13

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Formosa sediminum PS13, Complete Genome

Gene Summary

Adenine Count

1323363 bp

Thymine Count

1343372 bp

Guanine Count

632864 bp

Cytosine Count

635187 bp

Genome Length

3934786 bp

Protein-coding Genes

3358 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
chromosomal replication initiator protein dnaaFNB79_00005A6GYW8Positive1 - 142854128.1
low molecular weight phosphotyrosine protein phosphataseFNB79_00010Q55535Positive1456 - 189316441.4
sam-dependent methyltransferaseFNB79_00015Q9KUD9Positive1941 - 266026873.6
peptidoglycan-binding protein lysmFNB79_00020Not AvailableNegative2664 - 333524785.9
endolytic transglycosylase mltgFNB79_00025P44720Negative3558 - 460139398.5
gnat family n-acetyltransferaseFNB79_00030Q9KL03Negative4601 - 512520261.2
diaminopimelate epimeraseFNB79_00035A6GYX5Negative5119 - 589829065.2
pdz domain-containing proteinFNB79_00040P39099Positive6047 - 745350862.3
trna (guanine-n1)-methyltransferaseFNB79_00045Not AvailablePositive7865 - 848523767.4
trna (guanosine(37)-n1)-methyltransferase trmdFNB79_00050A0LZ03Positive8620 - 929725489.8

Displaying genes 1 – 10 of 3420 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.