Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Formosa
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Formosa |
| Species | Formosa sediminum |
| Strain | PS13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1323363 bp
Thymine Count
1343372 bp
Guanine Count
632864 bp
Cytosine Count
635187 bp
Genome Length
3934786 bp
Protein-coding Genes
3358 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromosomal replication initiator protein dnaa | FNB79_00005 | A6GYW8 | Positive | 1 - 1428 | 54128.1 |
| low molecular weight phosphotyrosine protein phosphatase | FNB79_00010 | Q55535 | Positive | 1456 - 1893 | 16441.4 |
| sam-dependent methyltransferase | FNB79_00015 | Q9KUD9 | Positive | 1941 - 2660 | 26873.6 |
| peptidoglycan-binding protein lysm | FNB79_00020 | Not Available | Negative | 2664 - 3335 | 24785.9 |
| endolytic transglycosylase mltg | FNB79_00025 | P44720 | Negative | 3558 - 4601 | 39398.5 |
| gnat family n-acetyltransferase | FNB79_00030 | Q9KL03 | Negative | 4601 - 5125 | 20261.2 |
| diaminopimelate epimerase | FNB79_00035 | A6GYX5 | Negative | 5119 - 5898 | 29065.2 |
| pdz domain-containing protein | FNB79_00040 | P39099 | Positive | 6047 - 7453 | 50862.3 |
| trna (guanine-n1)-methyltransferase | FNB79_00045 | Not Available | Positive | 7865 - 8485 | 23767.4 |
| trna (guanosine(37)-n1)-methyltransferase trmd | FNB79_00050 | A0LZ03 | Positive | 8620 - 9297 | 25489.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
