Formosa sediminum PS13

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Formosa

Description

Formosa sediminum PS13 is a Gram-negative bacterium characterized by its rod-shaped morphology. This species has been identified with a single replicon, indicating a streamlined genetic organization that may contribute to its adaptability in various environments. The strain is cataloged under the accession number CP041637.1, which provides a reference point for genomic studies and further research. The traits of Formosa sediminum PS13 highlight its potential ecological role, particularly in sedimentary environments where Gram-negative bacteria are often crucial for nutrient cycling. The rod shape of the organism may confer advantages in motility and colonization, enabling it to thrive in complex habitats. Understanding the features of Formosa sediminum PS13 contributes to the broader knowledge of microbial diversity and function in sedimentary ecosystems. Its single replicon may suggest evolutionary adaptations that enhance survival in specific ecological niches, showcasing the intricate relationships between microbial life and their environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFormosa
SpeciesFormosa sediminum
StrainPS13

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Formosa sediminum PS13, Complete Genome

Gene Summary

Adenine Count

1323363 bp

Thymine Count

1343372 bp

Guanine Count

632864 bp

Cytosine Count

635187 bp

Genome Length

3934786 bp

Protein-coding Genes

3358 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
php domain-containing proteinFNB79_13155P44176Negative3001115 - 300169922126.4
repressor lexaFNB79_13160P0DN68Negative3002048 - 300265022327.9
putative dna modification/repair radical sam proteinFNB79_13165Not AvailablePositive3002810 - 300407248243.2
dna metabolism proteinFNB79_13170Not AvailablePositive3004080 - 300484430185.1
giy-yig nuclease family proteinFNB79_13175Q49UZ7Negative3005196 - 300550112151.4
hypothetical proteinFNB79_13180Not AvailableNegative3005792 - 300639122943.6
protein tyrosine phosphataseFNB79_13185Q681Z2Negative3006647 - 300721921886.5
ohr family peroxiredoxinFNB79_13190P0A0V4Negative3007504 - 300793815257.9
duf4437 domain-containing proteinFNB79_13195Not AvailableNegative3008320 - 300916230543.9
oxygen-insensitive nad(p)h nitroreductaseFNB79_13200P15888Negative3009187 - 300984624651.3

Displaying genes 2631 – 2640 of 3420 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.