Formosa sediminum PS13

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Formosa

Description

Formosa sediminum PS13 is a Gram-negative bacterium characterized by its rod-shaped morphology. This species has been identified with a single replicon, indicating a streamlined genetic organization that may contribute to its adaptability in various environments. The strain is cataloged under the accession number CP041637.1, which provides a reference point for genomic studies and further research. The traits of Formosa sediminum PS13 highlight its potential ecological role, particularly in sedimentary environments where Gram-negative bacteria are often crucial for nutrient cycling. The rod shape of the organism may confer advantages in motility and colonization, enabling it to thrive in complex habitats. Understanding the features of Formosa sediminum PS13 contributes to the broader knowledge of microbial diversity and function in sedimentary ecosystems. Its single replicon may suggest evolutionary adaptations that enhance survival in specific ecological niches, showcasing the intricate relationships between microbial life and their environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFormosa
SpeciesFormosa sediminum
StrainPS13

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Formosa sediminum PS13, Complete Genome

Gene Summary

Adenine Count

1323363 bp

Thymine Count

1343372 bp

Guanine Count

632864 bp

Cytosine Count

635187 bp

Genome Length

3934786 bp

Protein-coding Genes

3358 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
n-acetyl-alpha-d-glucosaminyl l-malate synthase bshaFNB79_12905Q81ST7Positive2943771 - 294491342837.1
fad-binding proteinFNB79_12910Q57252Positive2945067 - 2947994108380.0
udp-2,3-diacylglucosamine diphosphataseFNB79_12915Q5E4E9Negative2947986 - 294886734065.2
chorismate synthaseFNB79_12920A6GXP5Positive2949066 - 295012738177.8
dicarboxylate/amino acid:cation symporterFNB79_12925P24944Positive2950275 - 295157946532.7
dsba family oxidoreductaseFNB79_12930P39598Positive2951930 - 295257724680.5
hypothetical proteinFNB79_12935Not AvailableNegative2952640 - 295330824672.0
thiol-disulfide oxidoreductase dcc family proteinFNB79_12940P40761Negative2953398 - 295381415950.8
duf3575 domain-containing proteinFNB79_12945Not AvailableNegative2953826 - 295456928875.0
dna mismatch repair protein mutsFNB79_12950Q03AZ5Negative2954629 - 295679483169.9

Displaying genes 2581 – 2590 of 3420 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.