Formosa sediminum PS13

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Formosa

Description

Formosa sediminum PS13 is a Gram-negative bacterium characterized by its rod-shaped morphology. This species has been identified with a single replicon, indicating a streamlined genetic organization that may contribute to its adaptability in various environments. The strain is cataloged under the accession number CP041637.1, which provides a reference point for genomic studies and further research. The traits of Formosa sediminum PS13 highlight its potential ecological role, particularly in sedimentary environments where Gram-negative bacteria are often crucial for nutrient cycling. The rod shape of the organism may confer advantages in motility and colonization, enabling it to thrive in complex habitats. Understanding the features of Formosa sediminum PS13 contributes to the broader knowledge of microbial diversity and function in sedimentary ecosystems. Its single replicon may suggest evolutionary adaptations that enhance survival in specific ecological niches, showcasing the intricate relationships between microbial life and their environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFormosa
SpeciesFormosa sediminum
StrainPS13

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Formosa sediminum PS13, Complete Genome

Gene Summary

Adenine Count

1323363 bp

Thymine Count

1343372 bp

Guanine Count

632864 bp

Cytosine Count

635187 bp

Genome Length

3934786 bp

Protein-coding Genes

3358 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf4198 domain-containing proteinFNB79_00705Not AvailablePositive148778 - 14949427045.2
hypothetical proteinFNB79_00710Not AvailablePositive149556 - 14989412701.4
hypothetical proteinFNB79_00715Not AvailablePositive149905 - 15020411078.8
pepsy domain-containing proteinFNB79_00720Not AvailablePositive150209 - 15175659736.4
frg domain-containing proteinFNB79_00725Not AvailableNegative151765 - 15272437799.2
alanine dehydrogenaseFNB79_00730Q9SMZ4Negative152711 - 15391645475.8
Tmrna,resume consensus sequence (at 89): tttaaacggcgagaataaNot AvailableNot AvailablePositive154225 - 154618Not Available
helix-turn-helix transcriptional regulatorFNB79_00740G3XCU2Negative155336 - 15620533906.3
tonb-dependent receptorFNB79_00745Q8DD41Positive156378 - 15881091267.0
hypothetical proteinFNB79_00750Not AvailablePositive158852 - 16012946740.9

Displaying genes 141 – 150 of 3420 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.