Xanthobacter dioxanivorans YN2

Gram-negative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Xanthobacteraceae

Genus

Xanthobacter

Description

Xanthobacter dioxanivorans YN2 is a Gram-negative bacterium notable for its ability to degrade dioxane, an emerging contaminant in groundwater. This species is characterized by the presence of flagella, which facilitate motility and can enhance its ability to colonize various environments. The genomic structure of X. dioxanivorans YN2 is distinguished by the presence of five replicons, indicating a complex genome organization that may contribute to its metabolic versatility. Each of these replicons may harbor essential genes involved in the bacterium's degradation pathways and survival mechanisms in diverse ecological niches. The accession numbers associated with the genome of Xanthobacter dioxanivorans YN2 are CP063362.1, CP063363.1, CP063364.1, CP063365.1, and CP063366.1. These sequences provide valuable resources for further research into the genetic and biochemical pathways that enable this organism to break down dioxane and potentially other xenobiotic compounds. The ecological significance of Xanthobacter dioxanivorans YN2 lies in its role in bioremediation. Its ability to metabolize harmful pollutants can contribute to the restoration of contaminated sites, highlighting the importance of such microorganisms in environmental microbiology and the development of sustainable remediation strategies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyXanthobacteraceae
GenusXanthobacter
SpeciesXanthobacter dioxanivorans
StrainYN2

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xanthobacter dioxanivorans YN2, Complete Genome

Gene Summary

Adenine Count

5339 bp

Thymine Count

5588 bp

Guanine Count

9992 bp

Cytosine Count

8719 bp

Genome Length

29638 bp

Protein-coding Genes

32 genes

Non-Coding Genes

1 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
AttlNot AvailableNot AvailablePositive2389112 - 2389142Not Available
Tail tape measure proteinEZH22_11270Not AvailableNegative2392543 - 239454670609.7
Portal proteinEZH22_11275P59217Negative2394547 - 239615459792.6
Gp1EZH22_11280Not AvailableNegative2396120 - 239649413620.4
head-tail adaptor proteinEZH22_11285Not AvailableNegative2396491 - 239682312439.1
duf3168 domain-containing proteinEZH22_11290Not AvailableNegative2396816 - 239725015827.4
Head/tail componentEZH22_11295Not AvailableNegative2397247 - 239763914873.0
Head-tail connector family proteinEZH22_11300Not AvailableNegative2397636 - 239793510673.9
Putative endonucleaseEZH22_11305Not AvailableNegative2398069 - 239943050814.9
phage tail assembly chaperoneEZH22_11310Not AvailableNegative2399570 - 240014521212.3

Displaying genes 1 – 10 of 6290 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.