Novosphingobium humi R1-4

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium humi R1-4 is characterized by the presence of flagella, which is an important trait for mobility and potential environmental adaptation. This bacterium contains a total of four replicons, indicating a complex genomic structure that may support diverse metabolic capabilities and resilience in various ecological niches. The genomic sequences of Novosphingobium humi R1-4 are cataloged under several accessions: CP117417.1, CP117418.1, CP117419.1, and CP117420.1. These sequences can provide insights into the genetic makeup and functional potential of this species, allowing for a better understanding of its role in its habitat. The presence of flagella suggests that Novosphingobium humi R1-4 may actively navigate its environment, which could be significant in the context of its ecological interactions. The ability to move towards or away from certain stimuli could enhance its survival and competitiveness in diverse microbial communities. Additionally, the four replicons may afford the organism a greater genetic flexibility, potentially enabling it to adapt to varied environmental conditions or substrates. In summary, Novosphingobium humi R1-4 is a motile bacterium with a complex genomic architecture, which could contribute to its ecological versatility and adaptability in microbial ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium humi
StrainR1-4

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium humi R1-4, Complete Genome

Gene Summary

Adenine Count

624047 bp

Thymine Count

625173 bp

Guanine Count

1097387 bp

Cytosine Count

1092600 bp

Genome Length

3439207 bp

Protein-coding Genes

3068 genes

Non-Coding Genes

159 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
polysaccharide export proteinPQ457_15790P22236Positive3371257 - 337239039885.9
glycosyltransferase family 1 proteinPQ457_15795A4FQ08Positive3372401 - 337369347144.4
porin family proteinPQ457_15800Not AvailablePositive3373690 - 337507249853.9
transferrin-binding protein-like solute binding proteinPQ457_15805Not AvailablePositive3375091 - 337613735162.1
sdr family nad(p)-dependent oxidoreductasePQ457_15810P25970Negative3376144 - 337690826332.1
aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzymePQ457_15815Q609V1Negative3376905 - 337826947954.9
type i polyketide synthasePQ457_15820Q7TXL8Negative3378301 - 3385629255941.0
glycosyltransferasePQ457_15825C7R101Positive3385904 - 338723849028.6
cdp-alcohol phosphatidyltransferase family proteinPQ457_15830Q6A8U1Positive3387235 - 338793326043.4
d-glycero-beta-d-manno-heptose-7-phosphate kinasePQ457_15835A8I5B0Positive3388055 - 338947950107.5

Displaying genes 3161 – 3170 of 4435 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.