Novosphingobium humi R1-4

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Novosphingobium

Description

Novosphingobium humi R1-4 is characterized by the presence of flagella, which is an important trait for mobility and potential environmental adaptation. This bacterium contains a total of four replicons, indicating a complex genomic structure that may support diverse metabolic capabilities and resilience in various ecological niches. The genomic sequences of Novosphingobium humi R1-4 are cataloged under several accessions: CP117417.1, CP117418.1, CP117419.1, and CP117420.1. These sequences can provide insights into the genetic makeup and functional potential of this species, allowing for a better understanding of its role in its habitat. The presence of flagella suggests that Novosphingobium humi R1-4 may actively navigate its environment, which could be significant in the context of its ecological interactions. The ability to move towards or away from certain stimuli could enhance its survival and competitiveness in diverse microbial communities. Additionally, the four replicons may afford the organism a greater genetic flexibility, potentially enabling it to adapt to varied environmental conditions or substrates. In summary, Novosphingobium humi R1-4 is a motile bacterium with a complex genomic architecture, which could contribute to its ecological versatility and adaptability in microbial ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusNovosphingobium
SpeciesNovosphingobium humi
StrainR1-4

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Novosphingobium humi R1-4, Complete Genome

Gene Summary

Adenine Count

17621 bp

Thymine Count

16838 bp

Guanine Count

30925 bp

Cytosine Count

30812 bp

Genome Length

96196 bp

Protein-coding Genes

79 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Quec-like queosine biosynthesis proteinPQ457_01345Q2G3K1Positive293748 - 29444624703.6
ompa family proteinPQ457_01350P84838Negative294613 - 29572238477.2
Ribonuclease iiiPQ457_01355Not AvailableNegative295885 - 29633715830.5
Putative tail proteinPQ457_01360Not AvailableNegative296378 - 29856476090.6
Hypothetical proteinPQ457_01365Not AvailableNegative298576 - 29900415241.5
Minor tail proteinPQ457_01370Not AvailableNegative299001 - 29981929630.3
Putative capsid and scaffold proteinPQ457_01375A0MZE7Negative299816 - 30217084272.7
Putative tail proteinPQ457_01380Not AvailableNegative302189 - 30278519620.1
phage tail assembly chaperonePQ457_01385Not AvailableNegative302778 - 3029395767.92
gene transfer agent family proteinPQ457_01390Not AvailableNegative303059 - 30337010925.3

Displaying genes 1 – 10 of 4435 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.