Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| family 16 glycosylhydrolase | PQ457_14790 | O33680 | Negative | 3147898 - 3149637 | 61234.1 |
| m48 family metalloprotease | PQ457_14795 | Q8ZCC3 | Positive | 3150212 - 3151711 | 51873.4 |
| phosphoenolpyruvate carboxykinase (gtp) | PQ457_14800 | Q82I71 | Positive | 3152059 - 3153888 | 66180.5 |
| nucleotide sugar dehydrogenase | PQ457_14805 | O33952 | Positive | 3154286 - 3155452 | 42923.7 |
| Trna-gly | Not Available | Not Available | Positive | 3156032 - 3156105 | Not Available |
| gnat family n-acetyltransferase | PQ457_14815 | Q7PCJ8 | Positive | 3156287 - 3156790 | 18564.2 |
| murein l,d-transpeptidase catalytic domain family protein | PQ457_14820 | Not Available | Positive | 3156851 - 3157462 | 21728.1 |
| l,d-transpeptidase family protein | PQ457_14825 | P22525 | Negative | 3157513 - 3159027 | 54309.2 |
| dmt family transporter | PQ457_14830 | Q9ZJZ2 | Positive | 3159266 - 3160102 | 29378.8 |
| aconitate hydratase acna | PQ457_14835 | P37032 | Positive | 3160371 - 3163043 | 96423.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

