Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 16 protein | PQ457_14640 | O33680 | Negative | 3113274 - 3114200 | 33679.1 |
| acyltransferase | PQ457_14645 | Q8Y7I6 | Negative | 3114197 - 3115435 | 45913.6 |
| o-antigen ligase family protein | PQ457_14650 | Q02729 | Negative | 3115428 - 3116720 | 45775.1 |
| hypothetical protein | PQ457_14655 | Not Available | Positive | 3117255 - 3117833 | 19109.8 |
| glycosyltransferase family 2 protein | PQ457_14660 | P33697 | Positive | 3118060 - 3119439 | 50494.1 |
| glycosyltransferase family 4 protein | PQ457_14665 | Q7TY88 | Positive | 3119439 - 3121067 | 59455.3 |
| hlyd family type i secretion periplasmic adaptor subunit | PQ457_14670 | Q7ANN5 | Negative | 3121133 - 3122515 | 49916.8 |
| type i secretion system permease/atpase | PQ457_14675 | Q7ANN4 | Negative | 3122519 - 3124288 | 62961.7 |
| polysaccharide biosynthesis tyrosine autokinase | PQ457_14680 | P33698 | Negative | 3124317 - 3126491 | 77116.6 |
| acyltransferase | PQ457_14685 | Q2FV54 | Positive | 3127046 - 3128146 | 40625.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

