Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2141 domain-containing protein | PQ457_14540 | Not Available | Positive | 3089358 - 3089882 | 18719.6 |
| glycosyltransferase | PQ457_14545 | A5U3B9 | Positive | 3090026 - 3091219 | 43339.6 |
| dipeptidase | PQ457_14550 | Q3SZM7 | Positive | 3091320 - 3092630 | 46900.9 |
| s8 family serine peptidase | PQ457_14555 | P00782 | Negative | 3092896 - 3095253 | 78941.1 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | PQ457_14560 | Q2G798 | Positive | 3095437 - 3096279 | 28797.6 |
| glutaminyl-peptide cyclotransferase | PQ457_14565 | Q84WV9 | Positive | 3096299 - 3097114 | 29570.9 |
| potassium channel family protein | PQ457_14570 | Not Available | Positive | 3097162 - 3097599 | 16031.8 |
| nucleoside transporter c-terminal domain-containing protein | PQ457_14575 | P44742 | Positive | 3097681 - 3099003 | 45264.6 |
| thermonuclease family protein | PQ457_14580 | Q99VJ0 | Positive | 3099008 - 3099565 | 20711.7 |
| nucleotide sugar dehydrogenase | PQ457_14585 | P39861 | Negative | 3099889 - 3101217 | 47178.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

