Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose-5-phosphate synthase | PQ457_14440 | Q2GC13 | Positive | 3065723 - 3067666 | 69011.9 |
| duf2141 domain-containing protein | PQ457_14445 | Not Available | Positive | 3067663 - 3068103 | 15383.4 |
| abc transporter substrate-binding protein | PQ457_14450 | Not Available | Negative | 3068190 - 3068816 | 21535.9 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | PQ457_14455 | Q5NP61 | Positive | 3069099 - 3070061 | 33820.3 |
| adenosyl-hopene transferase hpnh | PQ457_14460 | Q7TX84 | Positive | 3070085 - 3071230 | 42326.0 |
| phosphorylase | PQ457_14465 | B6EKZ7 | Negative | 3071302 - 3071979 | 24000.3 |
| squalene--hopene cyclase | PQ457_14470 | P33990 | Negative | 3071967 - 3073904 | 71604.2 |
| hydroxysqualene dehydroxylase hpne | PQ457_14475 | Q6N3F3 | Negative | 3073901 - 3075172 | 44534.4 |
| presqualene diphosphate synthase hpnd | PQ457_14480 | H2VFR7 | Negative | 3075173 - 3076033 | 31429.1 |
| squalene synthase hpnc | PQ457_14485 | Q5NP67 | Negative | 3076030 - 3076905 | 31914.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

