Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bile acid:sodium symporter | PQ457_13890 | P39836 | Negative | 2948583 - 2949542 | 33072.8 |
| mfs transporter | PQ457_13895 | E8ZB61 | Positive | 2949805 - 2951073 | 44041.4 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | PQ457_13900 | P96847 | Positive | 2951110 - 2952252 | 40579.9 |
| c-type cytochrome | PQ457_13905 | P25400 | Positive | 2952438 - 2952821 | 13325.3 |
| porin | PQ457_13910 | Not Available | Negative | 2952981 - 2954363 | 47134.4 |
| pqq-dependent catabolism-associated beta-propeller protein | PQ457_13915 | Not Available | Negative | 2954503 - 2955495 | 34404.3 |
| cytochrome c-550 pedf | PQ457_13920 | Q9I2C5 | Positive | 2955694 - 2956104 | 14592.1 |
| transporter substrate-binding domain-containing protein | PQ457_13925 | Not Available | Positive | 2956153 - 2957028 | 31079.5 |
| methanol/ethanol family pqq-dependent dehydrogenase | PQ457_13930 | Q9Z4J7 | Positive | 2957187 - 2958932 | 62581.0 |
| response regulator transcription factor | PQ457_13935 | A8R3T0 | Positive | 2959010 - 2959666 | 23434.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

