Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter permease subunit | PQ457_13790 | B4TNI7 | Positive | 2925134 - 2928337 | 112259.0 |
| efflux transporter outer membrane subunit | PQ457_13795 | Q51487 | Positive | 2928339 - 2929787 | 50297.8 |
| polysaccharide deacetylase family protein | PQ457_13800 | Not Available | Positive | 2929809 - 2930789 | 37025.0 |
| polyhydroxyalkanoic acid system family protein | PQ457_13805 | Not Available | Negative | 2930829 - 2931128 | 10543.0 |
| acyl-coa dehydrogenase c-terminal domain-containing protein | PQ457_13810 | Q5LLW7 | Negative | 2931128 - 2932918 | 64404.3 |
| 3-hydroxyacyl-coa dehydrogenase nad-binding domain-containing protein | PQ457_13815 | O32178 | Negative | 2932943 - 2935249 | 81298.6 |
| thiolase family protein | PQ457_13820 | O32177 | Negative | 2935249 - 2936370 | 37377.3 |
| duf2147 domain-containing protein | PQ457_13825 | Not Available | Positive | 2936614 - 2937018 | 14591.7 |
| outer membrane protein transport protein | PQ457_13830 | Q8CVU7 | Positive | 2937050 - 2938351 | 45418.1 |
| long-chain fatty acid--coa ligase | PQ457_13835 | P94547 | Positive | 2938389 - 2940059 | 61404.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

