Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | PQ457_13090 | P0ACN2 | Positive | 2770840 - 2771220 | 14027.8 |
| atp phosphoribosyltransferase regulatory subunit | PQ457_13095 | B6INM0 | Negative | 2771217 - 2772335 | 39229.2 |
| phosphoglycerate dehydrogenase | PQ457_13100 | P73821 | Negative | 2772678 - 2774270 | 56028.9 |
| phosphoserine transaminase | PQ457_13105 | Q8TNI1 | Negative | 2774347 - 2775474 | 40701.5 |
| extensin family protein | PQ457_13110 | Not Available | Positive | 2775737 - 2776414 | 23969.4 |
| peptidase | PQ457_13115 | Q8TW10 | Negative | 2776651 - 2777400 | 27597.3 |
| transglutaminase family protein | PQ457_13120 | Q49757 | Negative | 2777598 - 2778416 | 28922.4 |
| alpha-e domain-containing protein | PQ457_13125 | P9WL96 | Negative | 2778432 - 2779367 | 35290.4 |
| circularly permuted type 2 atp-grasp protein | PQ457_13130 | Q55587 | Negative | 2779378 - 2780814 | 52611.1 |
| excinuclease abc subunit uvrb | PQ457_13135 | Q56998 | Positive | 2781045 - 2783231 | 81557.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

