Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine-type recombinase/integrase | PQ457_12140 | Q2NB52 | Negative | 2577271 - 2578128 | 30904.2 |
| hypothetical protein | PQ457_12145 | Not Available | Negative | 2578167 - 2580053 | 64604.9 |
| hypothetical protein | PQ457_12150 | Not Available | Negative | 2580053 - 2580262 | 7558.43 |
| shikimate kinase | PQ457_12155 | Q2G733 | Positive | 2580352 - 2581014 | 23518.4 |
| 3-dehydroquinate synthase | PQ457_12160 | Q5NPY8 | Positive | 2581022 - 2582128 | 38451.4 |
| glutathione-disulfide reductase | PQ457_12165 | P48639 | Negative | 2582331 - 2583677 | 48300.9 |
| s9 family peptidase | PQ457_12170 | V5YMB3 | Negative | 2583769 - 2585595 | 68711.6 |
| glucose-6-phosphate isomerase | PQ457_12175 | Q2G7C4 | Negative | 2585954 - 2587483 | 53830.6 |
| signal peptidase i | PQ457_12180 | Q92JB1 | Positive | 2587724 - 2588572 | 31667.0 |
| ribonuclease iii | PQ457_12185 | Q9Z5U2 | Positive | 2588689 - 2589300 | 21876.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

