Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-methyl-5'-thioadenosine phosphorylase | PQ457_10990 | Q3J5E8 | Negative | 2339554 - 2340420 | 30742.8 |
| hypothetical protein | PQ457_10995 | Not Available | Positive | 2340541 - 2340678 | 4752.84 |
| atp-dependent chaperone clpb | PQ457_11000 | Q6N1H2 | Negative | 2340719 - 2343298 | 93854.5 |
| m28 family metallopeptidase | PQ457_11005 | P80561 | Negative | 2343414 - 2345192 | 62616.4 |
| outer membrane beta-barrel protein | PQ457_11010 | Not Available | Positive | 2345385 - 2346032 | 22535.0 |
| pitrilysin family protein | PQ457_11015 | P55679 | Positive | 2346120 - 2349008 | 101877.0 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatb | PQ457_11020 | Q2G4F6 | Negative | 2349258 - 2350757 | 54295.6 |
| hypothetical protein | PQ457_11025 | Not Available | Negative | 2350758 - 2351042 | 9740.31 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gata | PQ457_11030 | Q2G4F5 | Negative | 2351036 - 2352517 | 51541.3 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatc | PQ457_11035 | Q2G4F4 | Negative | 2352517 - 2352819 | 10503.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

