Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class iii extradiol dioxygenase subunit beta | PQ457_10890 | P22636 | Negative | 2319323 - 2320165 | 31426.7 |
| protocatechuate 4,5-dioxygenase subunit alpha | PQ457_10895 | P22635 | Negative | 2320177 - 2320617 | 16829.8 |
| amidohydrolase family protein | PQ457_10900 | G2IQQ5 | Negative | 2320675 - 2321700 | 37838.4 |
| duf1932 domain-containing protein | PQ457_10905 | P21336 | Negative | 2321707 - 2322546 | 29276.2 |
| lysr family transcriptional regulator | PQ457_10910 | Q88JX7 | Negative | 2322657 - 2323820 | 40724.4 |
| 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase | PQ457_10915 | G2IQQ8 | Positive | 2323935 - 2324609 | 23874.7 |
| 4-oxalomesaconate tautomerase | PQ457_10920 | Q0KJL4 | Positive | 2324891 - 2325952 | 36802.3 |
| amidohydrolase family protein | PQ457_10925 | O87170 | Positive | 2325979 - 2326857 | 32509.9 |
| lysr family transcriptional regulator | PQ457_10930 | P30864 | Positive | 2326925 - 2327854 | 33814.0 |
| efflux transporter outer membrane subunit | PQ457_10935 | P24126 | Positive | 2328075 - 2329511 | 49816.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

