Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate-semialdehyde dehydrogenase | PQ457_10540 | O67716 | Negative | 2247259 - 2248284 | 37252.8 |
| dpp iv n-terminal domain-containing protein | PQ457_10545 | Q6F3I7 | Negative | 2248367 - 2250622 | 82647.7 |
| 50s ribosomal protein l19 | PQ457_10550 | Q1GPJ8 | Negative | 2250749 - 2251129 | 14164.2 |
| trna (guanosine(37)-n1)-methyltransferase trmd | PQ457_10555 | Q2G8H2 | Negative | 2251126 - 2251875 | 26907.1 |
| tigr04222 domain-containing membrane protein | PQ457_10560 | Not Available | Negative | 2251924 - 2252667 | 27665.2 |
| hypothetical protein | PQ457_10565 | Not Available | Negative | 2252788 - 2253144 | 13651.4 |
| ribosome maturation factor rimm | PQ457_10570 | Q2G8H3 | Negative | 2253141 - 2253620 | 16669.9 |
| 30s ribosomal protein s16 | PQ457_10575 | Q2G8H4 | Negative | 2253638 - 2254003 | 13264.8 |
| signal recognition particle protein | PQ457_10580 | P0AGD9 | Negative | 2254030 - 2255460 | 50230.2 |
| Trna-ala | Not Available | Not Available | Positive | 2255610 - 2255685 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

