Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oligogalacturonate lyase family protein | PQ457_09810 | Q59418 | Negative | 2098374 - 2099684 | 48523.4 |
| mfs transporter | PQ457_09815 | P74168 | Positive | 2099827 - 2101311 | 53720.2 |
| rhamnogalacturonan acetylesterase | PQ457_09820 | O31528 | Positive | 2101308 - 2102114 | 28914.6 |
| glycoside hydrolase family 88 protein | PQ457_09825 | O31521 | Negative | 2102180 - 2103280 | 41357.4 |
| beta-galactosidase | PQ457_09830 | B0XNY2 | Negative | 2103296 - 2106262 | 105404.0 |
| l-rhamnose mutarotase | PQ457_09835 | Q28P47 | Negative | 2106271 - 2106585 | 12380.0 |
| right-handed parallel beta-helix repeat-containing protein | PQ457_09840 | Not Available | Negative | 2106670 - 2108124 | 52146.6 |
| alpha-l-arabinofuranosidase c-terminal domain-containing protein | PQ457_09845 | Q59219 | Negative | 2108121 - 2109665 | 56528.7 |
| rhamnogalacturonan acetylesterase | PQ457_09850 | O31523 | Positive | 2109753 - 2110973 | 43796.2 |
| tonb-dependent receptor | PQ457_09855 | Not Available | Negative | 2111039 - 2113969 | 104664.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

