Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cation:proton antiporter | PQ457_09610 | A6TEY9 | Negative | 2046676 - 2048427 | 62535.8 |
| tetr family transcriptional regulator | PQ457_09615 | Q88FX7 | Positive | 2048582 - 2049247 | 25170.9 |
| alpha/beta hydrolase | PQ457_09620 | I6Y9F7 | Positive | 2049352 - 2050362 | 34862.7 |
| thua domain-containing protein | PQ457_09625 | Not Available | Negative | 2050598 - 2051509 | 33240.9 |
| pqq-binding-like beta-propeller repeat protein | PQ457_09630 | Q59086 | Negative | 2051506 - 2052471 | 34369.3 |
| pqq-binding-like beta-propeller repeat protein | PQ457_09635 | Q59086 | Negative | 2052481 - 2053314 | 29320.4 |
| 3-dehydroquinate dehydratase | PQ457_09640 | Q89GF9 | Positive | 2053601 - 2054050 | 16488.8 |
| mfs transporter | PQ457_09645 | Q46916 | Positive | 2054047 - 2055309 | 44552.0 |
| hypothetical protein | PQ457_09650 | Not Available | Positive | 2055409 - 2055780 | 12448.8 |
| shikimate dehydrogenase | PQ457_09655 | Q82M83 | Positive | 2055840 - 2056748 | 31926.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

