Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium humi |
| Strain | R1-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
624047 bp
Thymine Count
625173 bp
Guanine Count
1097387 bp
Cytosine Count
1092600 bp
Genome Length
3439207 bp
Protein-coding Genes
3068 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent helicase hrpb | PQ457_08260 | P37024 | Negative | 1748104 - 1750551 | 88288.1 |
| polyprenyl synthetase family protein | PQ457_08265 | P44916 | Negative | 1750811 - 1751842 | 36698.6 |
| chorismate mutase | PQ457_08270 | Q57696 | Positive | 1751917 - 1752237 | 11891.2 |
| hamp domain-containing sensor histidine kinase | PQ457_08275 | Q9I0I2 | Negative | 1752448 - 1753764 | 48184.8 |
| response regulator transcription factor | PQ457_08280 | Q9I0I1 | Negative | 1753858 - 1754526 | 24663.4 |
| pepsy domain-containing protein | PQ457_08285 | Not Available | Negative | 1754607 - 1754849 | 9015.92 |
| simpl domain-containing protein | PQ457_08290 | P0A3U8 | Positive | 1755080 - 1755751 | 23439.5 |
| atp-binding cassette domain-containing protein | PQ457_08295 | Q45978 | Positive | 1755793 - 1757586 | 65923.8 |
| duf6456 domain-containing protein | PQ457_08300 | Not Available | Negative | 1757596 - 1758069 | 17451.9 |
| helix-turn-helix transcriptional regulator | PQ457_08305 | Not Available | Positive | 1758178 - 1758750 | 21012.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

